recipe antarna

antaRNA is a python based implementation of ant-colony optimization of the RNA inverse folding problem.

Homepage:

https://github.com/RobertKleinkauf/antarna

License:

MIT

Recipe:

/antarna/meta.yaml

Links:

biotools: antarna

package antarna

versions:

2.0.1.2-0

depends networkx:

depends numpy:

depends python:

2.7*

depends scipy:

depends uuid:

depends viennarna:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install antarna

and update with::

   mamba update antarna

To create a new environment, run:

mamba create --name myenvname antarna

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/antarna:<tag>

(see `antarna/tags`_ for valid values for ``<tag>``)

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