- recipe antismash-lite
antiSMASH - the antibiotics and Secondary Metabolite Analysis SHell
- Homepage:
- Documentation:
- Developer docs:
- License:
AGPL / AGPL-3.0
- Recipe:
- Links:
biotools: antismash, doi: 10.1093/nar/gkr466, doi: 10.1093/nar/gkt449, doi: 10.1093/nar/gkv437, doi: 10.1093/nar/gkx319, doi: 10.1093/nar/gkz310, doi: 10.1093/nar/gkab335, usegalaxy-eu: antismash
antiSMASH allows the rapid genome-wide identification, annotation and analysis of secondary metabolite biosynthesis gene clusters.
- package antismash-lite¶
-
- Versions:
6.1.1-0
,6.1.0-0
,6.0.1-1
,6.0.1-0
- Depends:
biopython
1.78.*
diamond
0.9.*
fasttree
2.1.*
glimmerhmm
3.0.*
helperlibs
>=0.2.0
hmmer
3.1b2
markupsafe
>=2.0
meme
<=4.11.2
muscle
3.8.*
python
>=3.7
scikit-learn
>=0.19
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install antismash-lite
and update with:
conda update antismash-lite
or use the docker container:
docker pull quay.io/biocontainers/antismash-lite:<tag>
(see antismash-lite/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/antismash-lite/README.html)