recipe artic-tools

A set of tools for working with the ARTIC bioinformatic pipeline.

Homepage

https://github.com/will-rowe/artic-tools

License

MIT

Recipe

/artic-tools/meta.yaml

package artic-tools

Versions

0.3.0-0,  0.2.6-0,  0.2.5-0,  0.2.4-0,  0.2.3-0,  0.2.2-0,  0.2.1-0,  0.2.0-0,  0.1.2-0, 

0.3.0-0,  0.2.6-0,  0.2.5-0,  0.2.4-0,  0.2.3-0,  0.2.2-0,  0.2.1-0,  0.2.0-0,  0.1.2-0,  0.1.1-0

Depends

• boost-cpp >=1.70.0,<1.70.1.0a0

• bzip2 >=1.0.8,<2.0a0

• htslib >=1.10

• libcurl >=7.71.1,<8.0a0

• libgcc-ng >=7.5.0

• libstdcxx-ng >=7.5.0

• zlib >=1.2.11,<1.3.0a0

Required By

• artic

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install artic-tools

and update with:

conda update artic-tools

or use the docker container:

docker pull quay.io/biocontainers/artic-tools:<tag>

(see artic-tools/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/artic-tools/README.html)