recipe augur

Process pathogen genome data for the Nextstrain platform

Homepage:

https://github.com/nextstrain/augur

License:

AGPL / AGPL-3.0-only

Recipe:

/augur/meta.yaml

package augur

(downloads) docker_augur

Versions:
21.1.0-021.0.1-121.0.1-021.0.0-121.0.0-020.0.0-019.3.0-019.2.0-019.1.0-0

21.1.0-021.0.1-121.0.1-021.0.0-121.0.0-020.0.0-019.3.0-019.2.0-019.1.0-019.0.0-018.2.0-018.1.2-018.1.1-018.1.0-018.0.0-017.1.0-117.1.0-017.0.0-117.0.0-016.0.3-016.0.2-016.0.1-015.0.2-015.0.1-015.0.0-014.1.0-014.0.0-013.1.2-013.1.1-013.1.0-013.0.4-013.0.3-013.0.2-013.0.1-113.0.1-013.0.0-012.1.1-012.0.0-011.3.0-011.2.0-111.2.0-011.1.2-111.1.2-011.1.0-011.0.0-010.3.0-010.2.0-010.1.1-010.1.0-010.0.4-010.0.3-010.0.2-010.0.0-110.0.0-09.0.0-19.0.0-08.0.0-07.0.2-06.4.3-06.4.2-06.4.1-06.4.0-06.3.0-06.2.0-06.1.1-06.1.0-06.0.0-05.4.1-05.4.0-05.3.0-05.2.1-05.2.0-05.1.1-05.1.0-04.0.0-03.1.5-13.1.5-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install augur

and update with:

conda update augur

or use the docker container:

docker pull quay.io/biocontainers/augur:<tag>

(see augur/tags for valid values for <tag>)

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