- recipe autometa
Automated extraction of genomes from shotgun metagenomes
- Homepage:
- Documentation:
- License:
AGPL / AGPL-3.0
- Recipe:
An automated binning pipeline for metagenomes, in particular host-associated and highly complex ones. Miller, I. J.; Rees, E. R.; Ross, J.; Miller, I.; Baxa, J.; Lopera, J.; Kerby, R. L.; Rey, F. E.; Kwan, J. C. Autometa: Automated extraction of microbial genomes from individual shotgun metagenomes. Nucleic Acids Research, 2019. DOI: https://doi.org/10.1093/nar/gkz148
- package autometa¶
-
- Versions:
2.2.0-0
,2.1.0-0
,2.0.3-0
,2.0.2-0
,2.0.1-0
,2.0.0-0
- Depends:
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install autometa
and update with:
conda update autometa
or use the docker container:
docker pull quay.io/biocontainers/autometa:<tag>
(see autometa/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/autometa/README.html)