recipe bactopia

Bactopia is a flexible pipeline for complete analysis of bacterial genomes.

Homepage

https://github.com/bactopia/bactopia

License

MIT

Recipe

/bactopia/meta.yaml

package bactopia

(downloads) docker_bactopia

Versions
1.4.11-11.4.11-01.4.10-01.4.9-01.4.8-01.4.7-01.4.6-01.4.5-01.4.4-0

1.4.11-11.4.11-01.4.10-01.4.9-01.4.8-01.4.7-01.4.6-01.4.5-01.4.4-01.4.3-01.4.2-01.4.1-01.4.0-01.3.1-01.3.0-01.2.4-01.2.2-01.2.1-01.2.0-01.1.0-11.1.0-01.0.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bactopia

and update with:

conda update bactopia

or use the docker container:

docker pull quay.io/biocontainers/bactopia:<tag>

(see bactopia/tags for valid values for <tag>)