recipe bactopia

Bactopia is an extensive workflow to process Illumina sequencing of bacterial genomes.

Homepage

https://github.com/bactopia/bactopia

License

MIT

Recipe

/bactopia/meta.yaml

package bactopia

(downloads) docker_bactopia

Versions

1.2.2-0, 1.2.1-0, 1.2.0-0, 1.1.0-1, 1.1.0-0, 1.0.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bactopia

and update with:

conda update bactopia

or use the docker container:

docker pull quay.io/biocontainers/bactopia:<tag>

(see bactopia/tags for valid values for <tag>)