recipe balrog

Balrog: A universal protein model for prokaryotic gene prediction

Homepage:

https://github.com/Markusjsommer/BalrogCPP

License:

MIT

Recipe:

/balrog/meta.yaml

package balrog

versions:

0.5.1-5,  0.5.1-4,  0.5.1-3,  0.5.1-2,  0.5.1-1,  0.5.1-0,  0.3.2-0,  0.3.1-1,  0.3.1-0, 

0.5.1-5,  0.5.1-4,  0.5.1-3,  0.5.1-2,  0.5.1-1,  0.5.1-0,  0.3.2-0,  0.3.1-1,  0.3.1-0,  0.2.19-0

depends _openmp_mutex:

>=4.5

depends libgcc-ng:

>=12

depends libstdcxx-ng:

>=12

depends libzlib:

>=1.2.13,<1.3.0a0

depends scipy:

depends zlib:

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install balrog

and update with::

   mamba update balrog

To create a new environment, run:

mamba create --name myenvname balrog

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/balrog:<tag>

(see `balrog/tags`_ for valid values for ``<tag>``)

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