recipe bandage

Bandage - a Bioinformatics Application for Navigating De novo Assembly Graphs Easily



GPL3 / GNU General Public License, version 3




doi: 10.1093/bioinformatics/btv383

package bandage

(downloads) docker_bandage



depends fonts-conda-ecosystem:

depends libgcc-ng:


depends libstdcxx-ng:


depends qt:


depends xorg-libxrender:



You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install bandage

and update with::

   mamba update bandage

To create a new environment, run:

mamba create --name myenvname bandage

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull<tag>

(see `bandage/tags`_ for valid values for ``<tag>``)

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