recipe basic

BASIC is a semi-de novo assembly method for assembling BCR and TCR genes from single cell RNA-seq data.

Homepage

http://ttic.uchicago.edu/~aakhan/BASIC/

License

MIT

Recipe

/basic/meta.yaml

package basic

(downloads) docker_basic

Versions

1.4.1-0, 1.4.0-1, 1.4.0-0, 1.3.1-0, 1.0.1-0

Depends bowtie2

Depends python

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install basic

and update with:

conda update basic

or use the docker container:

docker pull quay.io/biocontainers/basic:<tag>

(see basic/tags for valid values for <tag>)