basic

downloads

BASIC is a semi-de novo assembly method for assembling BCR and TCR genes from single cell RNA-seq data.

Home http://ttic.uchicago.edu/~aakhan/BASIC/
Versions 1.0.1, 1.3.1, 1.4.0
License MIT
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/basic

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install basic

and update with:

conda update basic

docker

A Docker container is available at https://quay.io/repository/biocontainers/basic.