recipe batvi

Detect viral integrations

Homepage:

https://www.comp.nus.edu.sg/~bioinfo/batvi/

License:

GPLv3+

Recipe:

/batvi/meta.yaml

package batvi

Versions:

1.04-8,  1.04-7,  1.04-6,  1.04-5,  1.04-4,  1.04-3,  1.04-2,  1.04-1

Depends:

• bedtools

• blast

• bwa

• libgcc-ng >=12

• libstdcxx-ng >=12

• libzlib >=1.2.13,<1.3.0a0

• openjdk

• picard

• samtools

• zlib

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install batvi

and update with:

conda update batvi

or use the docker container:

docker pull quay.io/biocontainers/batvi:<tag>

(see batvi/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/batvi/README.html)