recipe bazam

A tool to extract paired reads in FASTQ format from coordinate sorted BAM files

Homepage

https://github.com/ssadedin/bazam

License

LGPL v2.1

Recipe

/bazam/meta.yaml

package bazam

(downloads) docker_bazam

Versions

1.0.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bazam

and update with:

conda update bazam

or use the docker container:

docker pull quay.io/biocontainers/bazam:<tag>

(see bazam/tags for valid values for <tag>)