recipe bcov

BCov is a software package designed for predicting protein beta-sheet topology from amino acid sequence.

Homepage:

http://biocomp.unibo.it/savojard/bcov/index.html

License:

file

Recipe:

/bcov/meta.yaml

Links:

biotools: bcov, doi: 10.1093/bioinformatics/btt555

package bcov

(downloads) docker_bcov

versions:
1.0-9,  1.0-8,  1.0-7,  1.0-6,  1.0-5,  1.0-4,  1.0-3,  1.0-2,  1.0-1, 

1.0-9,  1.0-8,  1.0-7,  1.0-6,  1.0-5,  1.0-4,  1.0-3,  1.0-2,  1.0-1,  1.0-0

depends glpk:

>=5.0,<6.0a0

depends libgcc-ng:

>=12

depends libgfortran-ng:

depends libgfortran5:

>=12.3.0

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install bcov

and update with::

   mamba update bcov

To create a new environment, run:

mamba create --name myenvname bcov

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/bcov:<tag>

(see `bcov/tags`_ for valid values for ``<tag>``)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bcov/README.html)