recipe beamspy

BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python package)

Homepage:

https://github.com/computational-metabolomics/beamspy

License:

GPL3 / GNU General Public v3 (GPLv3)

Recipe:

/beamspy/meta.yaml

package beamspy

versions:

1.2.0-0,  1.1.0-0

depends biopython:

<=1.78

depends matplotlib:

depends networkx:

<=2.5

depends numpy:

depends pandas:

<=1.5.3

depends pyside2:

depends pyteomics:

<=4.4.1

depends python:

>3.8,<3.11

depends requests:

depends scipy:

depends seaborn:

depends tqdm:

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install beamspy

and update with::

   mamba update beamspy

To create a new environment, run:

mamba create --name myenvname beamspy

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/beamspy:<tag>

(see `beamspy/tags`_ for valid values for ``<tag>``)

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