recipe besst

Scaffolder for genomic assemblies.

Homepage

https://github.com/ksahlin/BESST

License

GPL / GPL-3.0

Recipe

/besst/meta.yaml

Links

biotools: besst, doi: 10.1186/1471-2105-15-281

package besst

(downloads) docker_besst

Versions

2.2.8-2, 2.2.8-0, 2.2.7-0, 2.2.3-0

Depends mathstats

>=0.2.6

Depends networkx

>=1.9

Depends pysam

>=0.7

Depends python

Depends scipy

>=0.9

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install besst

and update with:

conda update besst

or use the docker container:

docker pull quay.io/biocontainers/besst:<tag>

(see besst/tags for valid values for <tag>)