- recipe bgreat
BGREAT2 is a read mapping tool for NGS sequencing data that align reads on a de Bruijn graph. Preliminary version described at https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-016-1103-9 and used in Bcool a short read corrector (https://arxiv.org/abs/1711.03336)
- Homepage:
- License:
AGPL-3.0
- Recipe:
- package bgreat¶
-
- Versions:
2.0.0-6
,2.0.0-5
,2.0.0-4
,2.0.0-3
,2.0.0-2
,2.0.0-1
,2.0.0-0
- Depends:
libgcc-ng
>=12
libstdcxx-ng
>=12
libzlib
>=1.2.13,<1.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bgreat
and update with:
conda update bgreat
or use the docker container:
docker pull quay.io/biocontainers/bgreat:<tag>
(see bgreat/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bgreat/README.html)