recipe bifrost

Highly parallel construction and indexing of colored and compacted de Bruijn graphs

Homepage

https://github.com/pmelsted/bifrost

License

BSD / BSD-2-Clause

Recipe

/bifrost/meta.yaml

Links

doi: 10.1101/695338

package bifrost

Versions

1.0.5-1,  1.0.5-0,  1.0.4-1,  1.0.4-0,  1.0.3-0

Depends

• libgcc-ng >=9.3.0

• libstdcxx-ng >=9.3.0

• pthread-stubs

• zlib >=1.2.11,<1.3.0a0

Required By

• ggcaller

• rnabridge-denovo

• komb

• unitig-caller

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bifrost

and update with:

conda update bifrost

or use the docker container:

docker pull quay.io/biocontainers/bifrost:<tag>

(see bifrost/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bifrost/README.html)