recipe biobb_structure_manager

BioBB_structure_manager is a library to efficiently load and process biomolecular 3D structures.

Homepage:

https://github.com/bioexcel/BioBB_structure_manager

License:

APACHE / Apache Software License

Recipe:

/biobb_structure_manager/meta.yaml

[](https://www.codacy.com/app/jlgelpi/structure_manager?utm_source=mmb.irbbarcelona.org&utm_medium=referral&utm_content=gitlab/BioExcel/structure_manager&utm_campaign=Badge_Grade)

### Structure Manager package Python package to manage 3D structures. Wraps Bio.PDB with additional features.

package biobb_structure_manager

versions:

3.0.2-0,  3.0.1-0,  3.0.0-0,  1.0.0-0,  0.0.6-0,  0.0.5-0

depends biopython:

1.76

depends python:

3.7.*

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install biobb_structure_manager

and update with::

   mamba update biobb_structure_manager

To create a new environment, run:

mamba create --name myenvname biobb_structure_manager

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/biobb_structure_manager:<tag>

(see `biobb_structure_manager/tags`_ for valid values for ``<tag>``)

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[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/biobb_structure_manager/README.html)