recipe biobb_wf_mutations

Lysozyme plus Mutations workflow built using BioBB Based on the official Gromacs tutorial: http://www.mdtutorials.com/gmx/lysozyme/01_pdb2gmx.html

Homepage:

https://github.com/bioexcel/biobb_md

License:

APACHE / Apache Software License

Recipe:

/biobb_wf_mutations/meta.yaml

[![Documentation Status](https://readthedocs.org/projects/biobb-md/badge/?version=latest)](https://biobb-md.readthedocs.io/en/latest/?badge=latest)

# biobb_wf_mutations

### Introduction Lysozyme + Mutations workflow built using BioBB Based on the official Gromacs tutorial: http://www.mdtutorials.com/gmx/lysozyme/01_pdb2gmx.html Biobb (BioExcel building blocks) packages are Python building blocks that create new layer of compatibility and interoperability over popular bioinformatics tools. The latest documentation of this package can be found in our readthedocs site: [latest API documentation](http://biobb_md.readthedocs.io/en/latest/).

### Version February 2019 Release

### Copyright & Licensing This software has been developed in the MMB group (http://mmb.irbbarcelona.org) at the BSC (http://www.bsc.es/) & IRB (https://www.irbbarcelona.org/) for the European BioExcel (http://bioexcel.eu/), funded by the European Commission (EU H2020 [675728](http://cordis.europa.eu/projects/675728)).

* (c) 2015-2019 [Barcelona Supercomputing Center](https://www.bsc.es/) * (c) 2015-2019 [Institute for Research in Biomedicine](https://www.irbbarcelona.org/)

Licensed under the [Apache License 2.0](https://www.apache.org/licenses/LICENSE-2.0), see the file [LICENSE](LICENSE) for details.

![](https://bioexcel.eu/wp-content/uploads/2015/12/Bioexcell_logo_1080px_transp.png "Bioexcel")

package biobb_wf_mutations

(downloads) docker_biobb_wf_mutations

versions:

0.0.6-0,  0.0.5-0

depends biobb_adapters:

>=0.1.4

depends biobb_common:

>=0.1.2

depends biobb_io:

>=0.1.4

depends biobb_md:

>=0.1.5

depends biobb_model:

>=0.1.5

depends python:

>=3

requirements:

additional platforms:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install biobb_wf_mutations

and update with::

   mamba update biobb_wf_mutations

To create a new environment, run:

mamba create --name myenvname biobb_wf_mutations

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/biobb_wf_mutations:<tag>

(see `biobb_wf_mutations/tags`_ for valid values for ``<tag>``)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/biobb_wf_mutations/README.html)