recipe biocommons.seqrepo

Python package for writing and reading a local collection of biological sequences.

Homepage:

https://github.com/biocommons/biocommons.seqrepo

License:

Apache-2.0

Recipe:

/biocommons.seqrepo/meta.yaml

package biocommons.seqrepo

Versions:

0.6.5-0,  0.6.4-0,  0.6.3-0

Depends:

• bioutils >0.4

• coloredlogs

• pysam

• python >=3.6

• requests

• requests-html

• six

• tqdm

• yoyo-migrations

Required By:

• genomics-data-index

• hgvs

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install biocommons.seqrepo

and update with:

conda update biocommons.seqrepo

or use the docker container:

docker pull quay.io/biocontainers/biocommons.seqrepo:<tag>

(see biocommons.seqrepo/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/biocommons.seqrepo/README.html)