recipe bioconductor-affycontam

structured corruption of affymetrix cel file data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/affyContam.html

License:

Artistic-2.0

Recipe:

/bioconductor-affycontam/meta.yaml

Links:

biotools: affycontam, doi: 10.1038/nmeth.3252

structured corruption of cel file data to demonstrate QA effectiveness

package bioconductor-affycontam

Versions:

1.56.0-0,  1.52.0-0,  1.50.0-0,  1.48.0-1,  1.48.0-0,  1.46.0-0,  1.44.0-1,  1.42.0-1,  1.40.0-0, 

1.56.0-0,  1.52.0-0,  1.50.0-0,  1.48.0-1,  1.48.0-0,  1.46.0-0,  1.44.0-1,  1.42.0-1,  1.40.0-0,  1.38.0-0,  1.36.0-0,  1.34.0-0

Depends:

• bioconductor-affy >=1.76.0,<1.77.0

• bioconductor-affydata >=1.46.0,<1.47.0

• bioconductor-biobase >=2.58.0,<2.59.0

• r-base >=4.2,<4.3.0a0

Required By:

• bioconductor-arraymvout

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-affycontam

and update with:

conda update bioconductor-affycontam

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-affycontam:<tag>

(see bioconductor-affycontam/tags for valid values for <tag>)

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