recipe bioconductor-affycontam

structured corruption of affymetrix cel file data

Homepage

https://bioconductor.org/packages/3.12/bioc/html/affyContam.html

License

Artistic-2.0

Recipe

/bioconductor-affycontam/meta.yaml

Links

biotools: affycontam, doi: 10.1038/nmeth.3252

structured corruption of cel file data to demonstrate QA effectiveness

package bioconductor-affycontam

Versions

1.48.0-0,  1.46.0-0,  1.44.0-1,  1.42.0-1,  1.40.0-0,  1.38.0-0,  1.36.0-0,  1.34.0-0

Depends

• bioconductor-affy >=1.68.0,<1.69.0

• bioconductor-affydata >=1.38.0,<1.39.0

• bioconductor-biobase >=2.50.0,<2.51.0

• r-base >=4.0,<4.1.0a0

Required By

• bioconductor-arraymvout

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-affycontam

and update with:

conda update bioconductor-affycontam

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-affycontam:<tag>

(see bioconductor-affycontam/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-affycontam/README.html)