recipe bioconductor-affydata

Affymetrix Data for Demonstration Purpose



GPL (>= 2)



Example datasets of a slightly large size. They represent 'real world examples', unlike the artificial examples included in the package affy.

package bioconductor-affydata

(downloads) docker_bioconductor-affydata



depends bioconductor-affy:


depends bioconductor-data-packages:


depends curl:

depends r-base:




You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install bioconductor-affydata

and update with::

   mamba update bioconductor-affydata

To create a new environment, run:

mamba create --name myenvname bioconductor-affydata

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull<tag>

(see `bioconductor-affydata/tags`_ for valid values for ``<tag>``)

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