recipe bioconductor-affylmgui

GUI for limma Package with Affymetrix Microarrays

Homepage

https://bioconductor.org/packages/3.11/bioc/html/affylmGUI.html

License

GPL (>=2)

Recipe

/bioconductor-affylmgui/meta.yaml

A Graphical User Interface (GUI) for analysis of Affymetrix microarray gene expression data using the affy and limma packages.

package bioconductor-affylmgui

Versions

1.62.0-0,  1.60.0-0,  1.58.0-1,  1.56.0-0

Depends

• bioconductor-affy >=1.66.0,<1.67.0

• bioconductor-affyio >=1.58.0,<1.59.0

• bioconductor-affyplm >=1.64.0,<1.65.0

• bioconductor-annotationdbi >=1.50.0,<1.51.0

• bioconductor-biocgenerics >=0.34.0,<0.35.0

• bioconductor-gcrma >=2.60.0,<2.61.0

• bioconductor-limma >=3.44.0,<3.45.0

• r-base >=4.0,<4.1.0a0

• r-biocmanager

• r-r2html

• r-tkrplot

• r-xtable

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-affylmgui

and update with:

conda update bioconductor-affylmgui

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-affylmgui:<tag>

(see bioconductor-affylmgui/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-affylmgui/README.html)