recipe bioconductor-alphabeta

Computational inference of epimutation rates and spectra from high-throughput DNA methylation data in plants

Homepage

https://bioconductor.org/packages/3.11/bioc/html/AlphaBeta.html

License

GPL-3

Recipe

/bioconductor-alphabeta/meta.yaml

AlphaBeta is a computational method for estimating epimutation rates and spectra from high-throughput DNA methylation data in plants. The method has been specifically designed to: 1. analyze 'germline' epimutations in the context of multi-generational mutation accumulation lines (MA-lines). 2. analyze 'somatic' epimutations in the context of plant development and aging.

package bioconductor-alphabeta

(downloads) docker_bioconductor-alphabeta

Versions

1.2.0-01.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-alphabeta

and update with:

conda update bioconductor-alphabeta

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-alphabeta:<tag>

(see bioconductor-alphabeta/tags for valid values for <tag>)