bioconductor-amountain

downloads

A pure data-driven gene network, weighted gene co-expression network (WGCN) could be constructed only from expression profile. Different layers in such networks may represent different time points, multiple conditions or various species. AMOUNTAIN aims to search active modules in multi-layer WGCN using a continuous optimization approach.

Home http://bioconductor.org/packages/3.6/bioc/html/AMOUNTAIN.html
Versions 1.2.0, 1.4.0
License GPL (>= 2)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-amountain

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-amountain

and update with:

conda update bioconductor-amountain

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-amountain.