-
recipe
bioconductor-amountain
Active modules for multilayer weighted gene co-expression networks: a continuous optimization approach
- Homepage
https://bioconductor.org/packages/3.12/bioc/html/AMOUNTAIN.html
- License
GPL (>= 2)
- Recipe
- Links
biotools: amountain, doi: 10.1101/056952
A pure data-driven gene network, weighted gene co-expression network (WGCN) could be constructed only from expression profile. Different layers in such networks may represent different time points, multiple conditions or various species. AMOUNTAIN aims to search active modules in multi-layer WGCN using a continuous optimization approach.
-
package
bioconductor-amountain
¶ -
- Versions
1.16.0-0
,1.14.0-0
,1.12.0-0
,1.10.0-1
,1.10.0-0
,1.8.0-0
,1.6.0-0
,1.4.0-0
,1.2.0-0
- Depends
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-amountain
and update with:
conda update bioconductor-amountain
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-amountain:<tag>
(see bioconductor-amountain/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-amountain/README.html)