recipe bioconductor-annaffy

Annotation tools for Affymetrix biological metadata

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/annaffy.html

License:

LGPL

Recipe:

/bioconductor-annaffy/meta.yaml

Links:

biotools: annaffy, doi: 10.1038/nmeth.3252

Functions for handling data from Bioconductor Affymetrix annotation data packages. Produces compact HTML and text reports including experimental data and URL links to many online databases. Allows searching biological metadata using various criteria.

package bioconductor-annaffy

Versions:

1.70.0-0,  1.66.0-0,  1.63.1-0,  1.62.0-1,  1.62.0-0,  1.60.0-0,  1.58.0-0,  1.56.0-1,  1.54.0-0, 

1.70.0-0,  1.66.0-0,  1.63.1-0,  1.62.0-1,  1.62.0-0,  1.60.0-0,  1.58.0-0,  1.56.0-1,  1.54.0-0,  1.52.0-0,  1.50.0-0,  1.48.0-0

Depends:

• bioconductor-annotationdbi >=1.60.0,<1.61.0

• bioconductor-biobase >=2.58.0,<2.59.0

• bioconductor-go.db >=3.16.0,<3.17.0

• r-base >=4.2,<4.3.0a0

• r-biocmanager

• r-dbi

Required By:

• bioconductor-a4base

• bioconductor-webbioc

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-annaffy

and update with:

conda update bioconductor-annaffy

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-annaffy:<tag>

(see bioconductor-annaffy/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-annaffy/README.html)