recipe bioconductor-annotate

Using R enviroments for annotation.

Homepage:https://bioconductor.org/packages/3.8/bioc/html/annotate.html License:Artistic-2.0 Recipe:/bioconductor-annotate/meta.yaml Links:biotools: annotate, doi: 10.1038/nmeth.3252

package bioconductor-annotate

Versions:

1.60.0-0, 1.58.0-0, 1.56.0-0, 1.54.0-0, 1.50.0-1, 1.50.0-0, 1.48.0-1, 1.48.0-0, 1.46.1-0

Depends:

• bioconductor-annotationdbi >=1.44.0,<1.45.0
• bioconductor-biobase >=2.42.0,<2.43.0
• bioconductor-biocgenerics >=0.28.0,<0.29.0
• r-base >=3.5.1,<3.5.2.0a0
• r-dbi
• r-rcurl
• r-xml
• r-xtable

Required By:

• bioconductor-systempiper
• bioconductor-mvgst
• bioconductor-macat
• bioconductor-tigre
• bioconductor-methyanalysis
• bioconductor-gcmap
• bioconductor-drugvsdisease
• bioconductor-scisi
• bioconductor-cner
• bioconductor-preda
• bioconductor-semdist
• bioconductor-mgfr
• bioconductor-doqtl
• bioconductor-phenotest
• bioconductor-cafe
• bioconductor-gseabase
• bioconductor-gosim
• bioconductor-lumi
• bioconductor-idiogram
• bioconductor-rpsixml
• bioconductor-gostats
• bioconductor-methylumi
• bioconductor-category
• bioconductor-categorycompare
• bioconductor-qpgraph
• bioconductor-gcmapweb
• bioconductor-sampleclassifier
• bioconductor-neve2006
• bioconductor-geneplotter
• bioconductor-reportingtools
• bioconductor-chromheatmap
• bioconductor-pcpheno
• bioconductor-mlinterfaces
• bioconductor-pathwaysplice
• bioconductor-predasampledata
• bioconductor-genefilter
• bioconductor-globalancova
• bioconductor-geneanswers
• bioconductor-codelink
• bioconductor-mineica
• bioconductor-splicegear
• bioconductor-globaltest
• bioconductor-mgfm

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-annotate

and update with:

conda update bioconductor-annotate

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-annotate:<tag>

(see bioconductor-annotate/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-annotate/README.html)