recipe bioconductor-apcomplex

Estimate protein complex membership using AP-MS protein data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/apComplex.html

License:

LGPL

Recipe:

/bioconductor-apcomplex/meta.yaml

Links:

biotools: apcomplex, doi: 10.1093/bioinformatics/bti567

Functions to estimate a bipartite graph of protein complex membership using AP-MS data.

package bioconductor-apcomplex

Versions:

2.64.0-0,  2.60.0-0,  2.58.0-0,  2.56.0-1,  2.56.0-0,  2.54.0-0,  2.52.0-0,  2.50.0-1,  2.48.0-0, 

2.64.0-0,  2.60.0-0,  2.58.0-0,  2.56.0-1,  2.56.0-0,  2.54.0-0,  2.52.0-0,  2.50.0-1,  2.48.0-0,  2.46.0-0,  2.44.0-0

Depends:

• bioconductor-graph >=1.76.0,<1.77.0

• bioconductor-org.sc.sgd.db >=3.16.0,<3.17.0

• bioconductor-rbgl >=1.74.0,<1.75.0

• bioconductor-rgraphviz >=2.42.0,<2.43.0

• r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-apcomplex

and update with:

conda update bioconductor-apcomplex

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-apcomplex:<tag>

(see bioconductor-apcomplex/tags for valid values for <tag>)

Download stats

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