recipe bioconductor-apcomplex

Functions to estimate a bipartite graph of protein complex membership using AP-MS data.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/apComplex.html

License

LGPL

Recipe

/bioconductor-apcomplex/meta.yaml

Links

biotools: apcomplex, doi: 10.1093/bioinformatics/bti567

package bioconductor-apcomplex

(downloads) docker_bioconductor-apcomplex

Versions

2.48.0-0, 2.46.0-0, 2.44.0-0

Depends bioconductor-graph

>=1.60.0,<1.61.0

Depends bioconductor-org.sc.sgd.db

>=3.7.0,<3.8.0

Depends bioconductor-rbgl

>=1.58.0,<1.59.0

Depends bioconductor-rgraphviz

>=2.26.0,<2.27.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-apcomplex

and update with:

conda update bioconductor-apcomplex

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-apcomplex:<tag>

(see bioconductor-apcomplex/tags for valid values for <tag>)