recipe bioconductor-artms

Analytical R tools for Mass Spectrometry



GPL (>= 3) + file LICENSE



artMS provides a set of tools for the analysis of proteomics label-free datasets. It takes as input the MaxQuant search result output (evidence.txt file) and performs quality control, relative quantification using MSstats, downstream analysis and integration. artMS also provides a set of functions to re-format and make it compatible with other analytical tools, including, SAINTq, SAINTexpress, Phosfate, and PHOTON. Check []( for details.

package bioconductor-artms

(downloads) docker_bioconductor-artms


1.6.3-0, 1.4.0-0, 1.2.6-0, 1.0.10-0, 1.0.1-0

Required By


With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-artms

and update with:

conda update bioconductor-artms

or use the docker container:

docker pull<tag>

(see bioconductor-artms/tags for valid values for <tag>)