recipe bioconductor-bacon

Controlling bias and inflation in association studies using the empirical null distribution

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/bacon.html

License:

GPL (>= 2)

Recipe:

/bioconductor-bacon/meta.yaml

Links:

biotools: bacon

Bacon can be used to remove inflation and bias often observed in epigenome- and transcriptome-wide association studies. To this end bacon constructs an empirical null distribution using a Gibbs Sampling algorithm by fitting a three-component normal mixture on z-scores.

package bioconductor-bacon

(downloads) docker_bioconductor-bacon

Versions:
1.26.0-01.22.0-21.22.0-11.22.0-01.20.0-01.18.0-11.18.0-01.16.0-01.14.0-0

1.26.0-01.22.0-21.22.0-11.22.0-01.20.0-01.18.0-11.18.0-01.16.0-01.14.0-01.12.0-11.12.0-01.10.1-01.10.0-01.8.0-01.6.0-01.4.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-bacon

and update with:

conda update bioconductor-bacon

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-bacon:<tag>

(see bioconductor-bacon/tags for valid values for <tag>)

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