- recipe bioconductor-basilisk.utils
Basilisk Installation Utilities
Implements utilities for installation of the basilisk package, primarily for creation of the underlying Conda instance. This allows us to avoid re-writing the same R code in both the configure script (for centrally administered R installations) and in the lazy installation mechanism (for distributed package binaries). It is highly unlikely that developers - or, heaven forbid, end-users! - will need to interact with this package directly; they should be using the basilisk package instead.
- package bioconductor-basilisk.utils¶
While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.
Given that you already have a conda environment in which you want to have this package, install with:
mamba install bioconductor-basilisk.utils and update with:: mamba update bioconductor-basilisk.utils
To create a new environment, run:
mamba create --name myenvname bioconductor-basilisk.utils
myenvnamebeing a reasonable name for the environment (see e.g. the mamba docs for details and further options).
Alternatively, use the docker container:
docker pull quay.io/biocontainers/bioconductor-basilisk.utils:<tag> (see `bioconductor-basilisk.utils/tags`_ for valid values for ``<tag>``)