recipe bioconductor-beadarraysnp

Normalization and reporting of Illumina SNP bead arrays

Homepage

https://bioconductor.org/packages/3.14/bioc/html/beadarraySNP.html

License

GPL-2

Recipe

/bioconductor-beadarraysnp/meta.yaml

Links

biotools: beadarraysnp, doi: 10.1093/bioinformatics/btm311

Importing data from Illumina SNP experiments and performing copy number calculations and reports.

package bioconductor-beadarraysnp

Versions

1.60.0-0,  1.58.0-0,  1.56.0-1,  1.56.0-0,  1.54.0-0,  1.52.0-0,  1.50.0-1,  1.48.0-0,  1.46.0-0, 

1.60.0-0,  1.58.0-0,  1.56.0-1,  1.56.0-0,  1.54.0-0,  1.52.0-0,  1.50.0-1,  1.48.0-0,  1.46.0-0,  1.44.0-0,  1.42.0-0

Depends

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-quantsmooth >=1.60.0,<1.61.0

• r-base >=4.1,<4.2.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-beadarraysnp

and update with:

conda update bioconductor-beadarraysnp

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-beadarraysnp:<tag>

(see bioconductor-beadarraysnp/tags for valid values for <tag>)

Download stats

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