recipe bioconductor-biobroom

Turn Bioconductor objects into tidy data frames

Homepage

https://bioconductor.org/packages/3.11/bioc/html/biobroom.html

License

LGPL

Recipe

/bioconductor-biobroom/meta.yaml

This package contains methods for converting standard objects constructed by bioinformatics packages, especially those in Bioconductor, and converting them to tidy data. It thus serves as a complement to the broom package, and follows the same the tidy, augment, glance division of tidying methods. Tidying data makes it easy to recombine, reshape and visualize bioinformatics analyses.

package bioconductor-biobroom

Versions

1.20.0-0, 1.18.0-0, 1.16.0-1, 1.14.0-0

Depends

• bioconductor-biobase >=2.48.0,<2.49.0

• r-base >=4.0,<4.1.0a0

• r-broom

• r-dplyr

• r-tidyr

Required By

• bioconductor-tpp

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-biobroom

and update with:

conda update bioconductor-biobroom

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-biobroom:<tag>

(see bioconductor-biobroom/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-biobroom/README.html)