recipe bioconductor-biocancer

Interactive Multi-Omics Cancers Data Visualization and Analysis

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/bioCancer.html

License:

AGPL-3 | file LICENSE

Recipe:

/bioconductor-biocancer/meta.yaml

bioCancer is a Shiny App to visualize and analyse interactively Multi-Assays of Cancer Genomic Data.

package bioconductor-biocancer

Versions:

1.26.0-0,  1.22.0-0,  1.18.0-1,  1.18.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-1,  1.10.0-0

Depends:

• bioconductor-annotationdbi >=1.60.0,<1.61.0

• bioconductor-biobase >=2.58.0,<2.59.0

• bioconductor-clusterprofiler >=4.6.0,<4.7.0

• bioconductor-dose >=3.24.0,<3.25.0

• bioconductor-genetclassifier >=1.38.0,<1.39.0

• bioconductor-go.db >=3.16.0,<3.17.0

• bioconductor-org.bt.eg.db >=3.16.0,<3.17.0

• bioconductor-org.hs.eg.db >=3.16.0,<3.17.0

• bioconductor-reactome.db >=1.82.0,<1.83.0

• bioconductor-reactomepa >=1.42.0,<1.43.0

• r-algdesign >=1.1.7.3

• r-base >=4.2,<4.3.0a0

• r-diagrammer <=1.01

• r-dplyr >=0.7.2

• r-dt >=0.3

• r-htmlwidgets

• r-httr

• r-import >=1.1.0

• r-plyr

• r-r.methodss3

• r-r.oo

• r-radiant.data >=0.9.1

• r-shiny >=1.0.5

• r-shinythemes

• r-tibble

• r-visnetwork

• r-xml >=3.98

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-biocancer

and update with:

conda update bioconductor-biocancer

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-biocancer:<tag>

(see bioconductor-biocancer/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-biocancer/README.html)