recipe bioconductor-bioccheck

Bioconductor-specific package checks

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/BiocCheck.html

License:

Artistic-2.0

Recipe:

/bioconductor-bioccheck/meta.yaml

BiocCheck guides maintainers through Bioconductor best practicies. It runs Bioconductor-specific package checks by searching through package code, examples, and vignettes. Maintainers are required to address all errors, warnings, and most notes produced.

package bioconductor-bioccheck

Versions:

1.34.0-0,  1.30.0-0,  1.28.0-0,  1.26.0-1,  1.26.0-0,  1.24.0-0,  1.22.0-0,  1.20.0-1,  1.18.0-0

Depends:

• bioconductor-biocviews >=1.66.0,<1.67.0

• bioconductor-graph >=1.76.0,<1.77.0

• r-base >=4.2,<4.3.0a0

• r-biocmanager

• r-codetools

• r-httr

• r-knitr

• r-stringdist

Required By:

• bioconductor-annotationhubdata

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-bioccheck

and update with:

conda update bioconductor-bioccheck

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-bioccheck:<tag>

(see bioconductor-bioccheck/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-bioccheck/README.html)