Package Recipe 'bioconductor-biocor'

recipe bioconductor-biocor

Functional similarities

Homepage: https://bioconductor.org/packages/3.12/bioc/html/BioCor.html
License: MIT + file LICENSE
Recipe: /bioconductor-biocor/meta.yaml

Calculates functional similarities based on the pathways described on KEGG and REACTOME or in gene sets. These similarities can be calculated for pathways or gene sets, genes, or clusters and combined with other similarities. They can be used to improve networks, gene selection, testing relationships…

package bioconductor-biocor¶

Versions

1.14.0-0, 1.12.0-0, 1.10.0-0, 1.8.1-0, 1.6.0-0

Depends

bioconductor-biocparallel >=1.24.0,<1.25.0
bioconductor-gseabase >=1.52.0,<1.53.0
r-base >=4.0,<4.1.0a0
r-matrix

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-biocor

and update with:

conda update bioconductor-biocor

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-biocor:<tag>

(see bioconductor-biocor/tags for valid values for <tag>)

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-biocor/README.html)