- recipe bioconductor-biostrings
Efficient manipulation of biological strings
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/Biostrings.html
- License:
Artistic-2.0
- Recipe:
- Links:
biotools: biostrings, doi: 10.1038/nmeth.3252
Memory efficient string containers, string matching algorithms, and other utilities, for fast manipulation of large biological sequences or sets of sequences.
- package bioconductor-biostrings¶
-
- Versions:
2.66.0-1
,2.66.0-0
,2.62.0-2
,2.62.0-1
,2.62.0-0
,2.60.0-0
,2.58.0-1
,2.58.0-0
,2.56.0-0
,2.66.0-1
,2.66.0-0
,2.62.0-2
,2.62.0-1
,2.62.0-0
,2.60.0-0
,2.58.0-1
,2.58.0-0
,2.56.0-0
,2.54.0-0
,2.52.0-1
,2.50.2-0
,2.50.1-0
,2.48.0-0
,2.46.0-0
,2.44.2-0
,2.42.1-0
,2.40.2-0
,2.40.0-0
,2.38.4-0
,2.38.3-0
,2.38.2-0
,2.38.0-0
- Depends:
bioconductor-biocgenerics
>=0.44.0,<0.45.0
bioconductor-genomeinfodb
>=1.34.0,<1.35.0
bioconductor-iranges
>=2.32.0,<2.33.0
bioconductor-s4vectors
>=0.36.0,<0.37.0
bioconductor-xvector
>=0.38.0,<0.39.0
libblas
>=3.9.0,<4.0a0
libgcc-ng
>=12
liblapack
>=3.9.0,<4.0a0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-biostrings
and update with:
conda update bioconductor-biostrings
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-biostrings:<tag>
(see bioconductor-biostrings/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-biostrings/README.html)