Package Recipe 'bioconductor-biostrings'

recipe bioconductor-biostrings¶

Memory efficient string containers, string matching algorithms, and other utilities, for fast manipulation of large biological sequences or sets of sequences.

Homepage: https://bioconductor.org/packages/3.9/bioc/html/Biostrings.html
License: Artistic-2.0
Recipe: /bioconductor-biostrings/meta.yaml
Links: biotools: biostrings, doi: 10.1038/nmeth.3252

package bioconductor-biostrings¶

Versions: 2.50.2-0, 2.50.1-0, 2.48.0-0, 2.46.0-0, 2.44.2-0, 2.42.1-0, 2.40.2-0, 2.40.0-0, 2.38.4-0, 2.38.3-0, 2.38.2-0, 2.38.0-0
Depends bioconductor-biocgenerics: >=0.28.0,<0.29.0
Depends bioconductor-iranges: >=2.16.0,<2.17.0
Depends bioconductor-s4vectors: >=0.20.0,<0.21.0
Depends bioconductor-xvector: >=0.22.0,<0.23.0
Depends libgcc-ng: >=7.3.0
Depends r-base: >=3.5.1,<3.5.2.0a0
Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-biostrings

and update with:

conda update bioconductor-biostrings

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-biostrings:<tag>

(see bioconductor-biostrings/tags for valid values for <tag>)

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-biostrings/README.html)