recipe bioconductor-biotmle

Targeted Learning with Moderated Statistics for Biomarker Discovery

Homepage

https://bioconductor.org/packages/3.10/bioc/html/biotmle.html

License

file LICENSE

Recipe

/bioconductor-biotmle/meta.yaml

This package facilitates the discovery of biomarkers from biological sequencing data (e.g., microarrays, RNA-seq) based on the associations of potential biomarkers with exposure variables by implementing an inferential procedure that combines a generalization of moderated statistics with targeted minimum loss estimates of the average treatment effect whose estimator admits an asymptotically linear representations (in terms of an efficient influence function).

package bioconductor-biotmle

(downloads) docker_bioconductor-biotmle

Versions

1.10.0-0, 1.8.0-1, 1.6.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-biotmle

and update with:

conda update bioconductor-biotmle

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-biotmle:<tag>

(see bioconductor-biotmle/tags for valid values for <tag>)