bioconductor-biseq¶
The BiSeq package provides useful classes and functions to handle and analyze targeted bisulfite sequencing (BS) data such as reduced-representation bisulfite sequencing (RRBS) data. In particular, it implements an algorithm to detect differentially methylated regions (DMRs). The package takes already aligned BS data from one or multiple samples.
| Home | http://bioconductor.org/packages/3.7/bioc/html/BiSeq.html |
| Versions | 1.16.0, 1.18.0, 1.20.0 |
| License | LGPL-3 |
| Recipe | https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-biseq |
| Links | biotools: biseq, doi: 10.1093/bib/bbv095 |
Installation¶
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-biseq
and update with:
conda update bioconductor-biseq
A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-biseq.
Link to this page¶
Render an 
badge with the following Markdown:
[](http://bioconda.github.io/recipes/bioconductor-biseq/README.html)
