recipe bioconductor-bsgenome.cneoformansvargrubiikn99.ncbi.asm221672v1

Full Genome Sequence for Cryptococcus neoformans var. grubii KN99 (ASM221672v1)

Homepage:

https://bioconductor.org/packages/3.18/data/annotation/html/BSgenome.CneoformansVarGrubiiKN99.NCBI.ASM221672v1.html

License:

Artistic-2.0

Recipe:

/bioconductor-bsgenome.cneoformansvargrubiikn99.ncbi.asm221672v1/meta.yaml

Full genome sequences for Cryptococcus neoformans var. grubii KN99 (assembly ASM221672v1 assembly accession GCA_002216725.1).

package bioconductor-bsgenome.cneoformansvargrubiikn99.ncbi.asm221672v1

(downloads) docker_bioconductor-bsgenome.cneoformansvargrubiikn99.ncbi.asm221672v1

versions:

1.0.0-2,  1.0.0-1,  1.0.0-0

depends bioconductor-bsgenome:

>=1.70.0,<1.71.0

depends bioconductor-data-packages:

>=20231203

depends curl:

depends r-base:

>=4.3,<4.4.0a0

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install bioconductor-bsgenome.cneoformansvargrubiikn99.ncbi.asm221672v1

and update with::

   mamba update bioconductor-bsgenome.cneoformansvargrubiikn99.ncbi.asm221672v1

To create a new environment, run:

mamba create --name myenvname bioconductor-bsgenome.cneoformansvargrubiikn99.ncbi.asm221672v1

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/bioconductor-bsgenome.cneoformansvargrubiikn99.ncbi.asm221672v1:<tag>

(see `bioconductor-bsgenome.cneoformansvargrubiikn99.ncbi.asm221672v1/tags`_ for valid values for ``<tag>``)

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Link to this page

Render an install-with-bioconda badge with the following MarkDown:

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