recipe bioconductor-bsgenome.hsapiens.ucsc.hg18

Full genome sequences for Homo sapiens (UCSC version hg18)

Homepage

https://bioconductor.org/packages/3.11/data/annotation/html/BSgenome.Hsapiens.UCSC.hg18.html

License

Artistic-2.0

Recipe

/bioconductor-bsgenome.hsapiens.ucsc.hg18/meta.yaml

Full genome sequences for Homo sapiens (Human) as provided by UCSC (hg18, Mar. 2006) and stored in Biostrings objects.

package bioconductor-bsgenome.hsapiens.ucsc.hg18

Versions

1.3.1000-7, 1.3.1000-6, 1.3.1000-5, 1.3.1000-3, 1.3.1000-2, 1.3.1000-0

Depends

• bioconductor-bsgenome >=1.56.0,<1.57.0

• curl >=7.69.1,<8.0a0

• r-base >=4.0,<4.1.0a0

Required By

• bioconductor-bsgenome.hsapiens.ucsc.hg18.masked

• bioconductor-vanillaice

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-bsgenome.hsapiens.ucsc.hg18

and update with:

conda update bioconductor-bsgenome.hsapiens.ucsc.hg18

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-bsgenome.hsapiens.ucsc.hg18:<tag>

(see bioconductor-bsgenome.hsapiens.ucsc.hg18/tags for valid values for <tag>)

Link to this page

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