recipe bioconductor-bsgenome.hsapiens.ucsc.hg18

Full genome sequences for Homo sapiens (UCSC version hg18)

Homepage:

https://bioconductor.org/packages/3.16/data/annotation/html/BSgenome.Hsapiens.UCSC.hg18.html

License:

Artistic-2.0

Recipe:

/bioconductor-bsgenome.hsapiens.ucsc.hg18/meta.yaml

Full genome sequences for Homo sapiens (Human) as provided by UCSC (hg18, Mar. 2006) and stored in Biostrings objects.

package bioconductor-bsgenome.hsapiens.ucsc.hg18

Versions:

1.3.1000-13,  1.3.1000-12,  1.3.1000-11,  1.3.1000-10,  1.3.1000-9,  1.3.1000-8,  1.3.1000-7,  1.3.1000-6,  1.3.1000-5, 

1.3.1000-13,  1.3.1000-12,  1.3.1000-11,  1.3.1000-10,  1.3.1000-9,  1.3.1000-8,  1.3.1000-7,  1.3.1000-6,  1.3.1000-5,  1.3.1000-3,  1.3.1000-2,  1.3.1000-0

Depends:

• bioconductor-bsgenome >=1.66.0,<1.67.0

• bioconductor-data-packages >=20221102

• curl

• r-base >=4.2,<4.3.0a0

Required By:

• bioconductor-vanillaice

• bioconductor-bsgenome.hsapiens.ucsc.hg18.masked

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-bsgenome.hsapiens.ucsc.hg18

and update with:

conda update bioconductor-bsgenome.hsapiens.ucsc.hg18

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-bsgenome.hsapiens.ucsc.hg18:<tag>

(see bioconductor-bsgenome.hsapiens.ucsc.hg18/tags for valid values for <tag>)

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