Package Recipe 'bioconductor-bsgenome.mmusculus.ucsc.mm39'

recipe bioconductor-bsgenome.mmusculus.ucsc.mm39

Full genome sequences for Mus musculus (UCSC genome mm39, based on GRCm39)

Homepage:: https://bioconductor.org/packages/3.16/data/annotation/html/BSgenome.Mmusculus.UCSC.mm39.html
License:: Artistic-2.0
Recipe:: /bioconductor-bsgenome.mmusculus.ucsc.mm39/meta.yaml

Full genome sequences for Mus musculus (Mouse) as provided by UCSC (genome mm39, based on assembly GRCm39) and stored in Biostrings objects.

package bioconductor-bsgenome.mmusculus.ucsc.mm39¶

Versions:

1.4.3-2, 1.4.3-1, 1.4.3-0

Depends:

bioconductor-bsgenome >=1.66.0,<1.67.0
bioconductor-data-packages >=20221102
curl
r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-bsgenome.mmusculus.ucsc.mm39

and update with:

conda update bioconductor-bsgenome.mmusculus.ucsc.mm39

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-bsgenome.mmusculus.ucsc.mm39:<tag>

(see bioconductor-bsgenome.mmusculus.ucsc.mm39/tags for valid values for <tag>)

Download stats¶

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-bsgenome.mmusculus.ucsc.mm39/README.html)