recipe bioconductor-bsgenome.ptroglodytes.ucsc.pantro3

Full genome sequences for Pan troglodytes (UCSC version panTro3)

Homepage

https://bioconductor.org/packages/3.11/data/annotation/html/BSgenome.Ptroglodytes.UCSC.panTro3.html

License

Artistic-2.0

Recipe

/bioconductor-bsgenome.ptroglodytes.ucsc.pantro3/meta.yaml

Full genome sequences for Pan troglodytes (Chimp) as provided by UCSC (panTro3, Oct. 2010) and stored in Biostrings objects.

package bioconductor-bsgenome.ptroglodytes.ucsc.pantro3

Versions

1.4.0-4,  1.4.0-3,  1.4.0-2,  1.4.0-0

Depends

• bioconductor-bsgenome >=1.56.0,<1.57.0

• curl >=7.69.1,<8.0a0

• r-base >=4.0,<4.1.0a0

Required By

• bioconductor-bsgenome.ptroglodytes.ucsc.pantro3.masked

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-bsgenome.ptroglodytes.ucsc.pantro3

and update with:

conda update bioconductor-bsgenome.ptroglodytes.ucsc.pantro3

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-bsgenome.ptroglodytes.ucsc.pantro3:<tag>

(see bioconductor-bsgenome.ptroglodytes.ucsc.pantro3/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-bsgenome.ptroglodytes.ucsc.pantro3/README.html)