recipe bioconductor-bsgenome.vvinifera.urgi.iggp8x

Full reference nuclear genome sequences for Vitis vinifera subsp. vinifera PN40024 (IGGP version 8X)

Homepage

https://bioconductor.org/packages/3.11/data/annotation/html/BSgenome.Vvinifera.URGI.IGGP8X.html

License

CC0

Recipe

/bioconductor-bsgenome.vvinifera.urgi.iggp8x/meta.yaml

Full reference nuclear genome sequences for Vitis vinifera subsp. vinifera PN40024 (derived from Pinot Noir and close to homozygosity after 6-9 rounds of selfing) as assembled by the IGGP (version 8X) and available at the URGI (INRA). More details in Jaillon et al (Nature, 2007).

package bioconductor-bsgenome.vvinifera.urgi.iggp8x

(downloads) docker_bioconductor-bsgenome.vvinifera.urgi.iggp8x

Versions

0.1-4, 0.1-3, 0.1-2, 0.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-bsgenome.vvinifera.urgi.iggp8x

and update with:

conda update bioconductor-bsgenome.vvinifera.urgi.iggp8x

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-bsgenome.vvinifera.urgi.iggp8x:<tag>

(see bioconductor-bsgenome.vvinifera.urgi.iggp8x/tags for valid values for <tag>)