recipe bioconductor-camera

Collection of annotation related methods for mass spectrometry data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/CAMERA.html

License:

GPL (>= 2)

Recipe:

/bioconductor-camera/meta.yaml

Links:

biotools: camera

Annotation of peaklists generated by xcms, rule based annotation of isotopes and adducts, isotope validation, EIC correlation based tagging of unknown adducts and fragments

package bioconductor-camera

Versions:

1.54.0-0,  1.50.0-2,  1.50.0-1,  1.50.0-0,  1.48.0-0,  1.46.0-1,  1.46.0-0,  1.44.0-0,  1.42.0-0, 

1.54.0-0,  1.50.0-2,  1.50.0-1,  1.50.0-0,  1.48.0-0,  1.46.0-1,  1.46.0-0,  1.44.0-0,  1.42.0-0,  1.40.0-1,  1.38.1-0,  1.38.0-0,  1.34.0-2,  1.34.0-0,  1.32.0-0,  1.28.0-1,  1.26.0-1,  1.26.0-0,  1.22.0-1,  1.22.0-0

Depends:

• bioconductor-biobase >=2.58.0,<2.59.0

• bioconductor-graph >=1.76.0,<1.77.0

• bioconductor-rbgl >=1.74.0,<1.75.0

• bioconductor-xcms >=3.20.0,<3.21.0

• libblas >=3.9.0,<4.0a0

• libgcc-ng >=12

• liblapack >=3.9.0,<4.0a0

• r-base >=4.2,<4.3.0a0

• r-hmisc

• r-igraph

Required By:

• bioconductor-ipo

• bioconductor-mait

• bioconductor-lobstahs

• bioconductor-metams

• r-metaboanalyst

• bioconductor-pth2o2lipids

• bioconductor-flagme

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-camera

and update with:

conda update bioconductor-camera

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-camera:<tag>

(see bioconductor-camera/tags for valid values for <tag>)

Download stats

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