recipe bioconductor-camera

Annotation of peaklists generated by xcms, rule based annotation of isotopes and adducts, isotope validation, EIC correlation based tagging of unknown adducts and fragments

Homepage

https://bioconductor.org/packages/3.9/bioc/html/CAMERA.html

License

GPL (>= 2)

Recipe

/bioconductor-camera/meta.yaml

Links

biotools: camera

package bioconductor-camera

(downloads) docker_bioconductor-camera

Versions

1.38.1-0, 1.38.0-0, 1.34.0-2, 1.34.0-0, 1.32.0-0, 1.28.0-1, 1.26.0-1, 1.26.0-0, 1.22.0-1, 1.22.0-0

Depends bioconductor-biobase

>=2.42.0,<2.43.0

Depends bioconductor-graph

>=1.60.0,<1.61.0

Depends bioconductor-rbgl

>=1.58.0,<1.59.0

Depends bioconductor-xcms

>=3.4.0,<3.5.0

Depends libgcc-ng

>=7.3.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-hmisc

Depends r-igraph

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-camera

and update with:

conda update bioconductor-camera

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-camera:<tag>

(see bioconductor-camera/tags for valid values for <tag>)