recipe bioconductor-category

Category Analysis

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/Category.html

License:

Artistic-2.0

Recipe:

/bioconductor-category/meta.yaml

Links:

biotools: category, doi: 10.1038/nmeth.3252

A collection of tools for performing category (gene set enrichment) analysis.

package bioconductor-category

Versions:

2.64.0-0,  2.60.0-0,  2.58.0-0,  2.56.0-1,  2.56.0-0,  2.54.0-0,  2.52.0-0,  2.50.0-1,  2.48.0-0, 

2.64.0-0,  2.60.0-0,  2.58.0-0,  2.56.0-1,  2.56.0-0,  2.54.0-0,  2.52.0-0,  2.50.0-1,  2.48.0-0,  2.46.0-0,  2.44.0-0,  2.42.1-0,  2.38.0-1,  2.38.0-0,  2.36.0-0

Depends:

• bioconductor-annotate >=1.76.0,<1.77.0

• bioconductor-annotationdbi >=1.60.0,<1.61.0

• bioconductor-biobase >=2.58.0,<2.59.0

• bioconductor-biocgenerics >=0.44.0,<0.45.0

• bioconductor-genefilter >=1.80.0,<1.81.0

• bioconductor-graph >=1.76.0,<1.77.0

• bioconductor-gseabase >=1.60.0,<1.61.0

• bioconductor-rbgl >=1.74.0,<1.75.0

• r-base >=4.2,<4.3.0a0

• r-dbi

• r-matrix

Required By:

• bioconductor-categorycompare

• bioconductor-meshr

• bioconductor-gmicr

• bioconductor-phenotest

• bioconductor-gostats

• bioconductor-reportingtools

• bioconductor-mirlab

• bioconductor-sctensor

• bioconductor-interactivedisplay

• bioconductor-cellhts2

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-category

and update with:

conda update bioconductor-category

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-category:<tag>

(see bioconductor-category/tags for valid values for <tag>)

Download stats

Link to this page

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