recipe bioconductor-category

A collection of tools for performing category (gene set enrichment) analysis.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/Category.html

License

Artistic-2.0

Recipe

/bioconductor-category/meta.yaml

Links

biotools: category, doi: 10.1038/nmeth.3252

package bioconductor-category

(downloads) docker_bioconductor-category

Versions

2.48.0-0, 2.46.0-0, 2.44.0-0, 2.42.1-0, 2.38.0-1, 2.38.0-0, 2.36.0-0

Depends bioconductor-annotate

>=1.60.0,<1.61.0

Depends bioconductor-annotationdbi

>=1.44.0,<1.45.0

Depends bioconductor-biobase

>=2.42.0,<2.43.0

Depends bioconductor-biocgenerics

>=0.28.0,<0.29.0

Depends bioconductor-genefilter

>=1.64.0,<1.65.0

Depends bioconductor-graph

>=1.60.0,<1.61.0

Depends bioconductor-gseabase

>=1.44.0,<1.45.0

Depends bioconductor-rbgl

>=1.58.0,<1.59.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-dbi

Depends r-matrix

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-category

and update with:

conda update bioconductor-category

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-category:<tag>

(see bioconductor-category/tags for valid values for <tag>)