recipe bioconductor-cellmapper

Infers cell type-specific expression based on co-expression similarity with known cell type marker genes. Can make accurate predictions using publicly available expression data, even when a cell type has not been isolated before.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/CellMapper.html

License

Artistic-2.0

Recipe

/bioconductor-cellmapper/meta.yaml

Links

biotools: cellmapper

package bioconductor-cellmapper

(downloads) docker_bioconductor-cellmapper

Versions

1.8.0-0, 1.6.0-0, 1.4.0-0, 1.2.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-cellmapper

and update with:

conda update bioconductor-cellmapper

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-cellmapper:<tag>

(see bioconductor-cellmapper/tags for valid values for <tag>)