recipe bioconductor-cellmapper

Predict genes expressed selectively in specific cell types

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/CellMapper.html

License:

Artistic-2.0

Recipe:

/bioconductor-cellmapper/meta.yaml

Links:

biotools: cellmapper

Infers cell type-specific expression based on co-expression similarity with known cell type marker genes. Can make accurate predictions using publicly available expression data, even when a cell type has not been isolated before.

package bioconductor-cellmapper

(downloads) docker_bioconductor-cellmapper

Versions:
1.24.0-01.20.0-01.18.0-01.16.0-11.16.0-01.14.0-01.12.0-01.10.0-11.8.0-0

1.24.0-01.20.0-01.18.0-01.16.0-11.16.0-01.14.0-01.12.0-01.10.0-11.8.0-01.6.0-01.4.0-01.2.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-cellmapper

and update with:

conda update bioconductor-cellmapper

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-cellmapper:<tag>

(see bioconductor-cellmapper/tags for valid values for <tag>)

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