recipe bioconductor-champdata

Data Packages for ChAMP package

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/ChAMPdata.html

License:

GPL-3

Recipe:

/bioconductor-champdata/meta.yaml

Provides datasets needed for ChAMP including a test dataset and blood controls for CNA analysis.

package bioconductor-champdata

Versions:

2.30.0-0,  2.26.0-1,  2.26.0-0,  2.24.0-0,  2.22.0-1,  2.22.0-0,  2.20.0-1,  2.20.0-0,  2.18.0-0, 

2.30.0-0,  2.26.0-1,  2.26.0-0,  2.24.0-0,  2.22.0-1,  2.22.0-0,  2.20.0-1,  2.20.0-0,  2.18.0-0,  2.16.0-1,  2.14.1-0,  2.14.0-0

Depends:

• bioconductor-biocgenerics >=0.44.0,<0.45.0

• bioconductor-data-packages >=20221105

• bioconductor-genomicranges >=1.50.0,<1.51.0

• curl

• r-base >=4.2,<4.3.0a0

Required By:

• bioconductor-champ

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-champdata

and update with:

conda update bioconductor-champdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-champdata:<tag>

(see bioconductor-champdata/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-champdata/README.html)