recipe bioconductor-chihaya

Save Delayed Operations to a HDF5 File






Saves the delayed operations of a DelayedArray to a HDF5 file. This enables efficient recovery of the DelayedArray's contents in other languages and analysis frameworks.

package bioconductor-chihaya

(downloads) docker_bioconductor-chihaya



depends bioconductor-delayedarray:


depends bioconductor-delayedarray:


depends bioconductor-hdf5array:


depends bioconductor-hdf5array:


depends bioconductor-rhdf5:


depends bioconductor-rhdf5:


depends bioconductor-rhdf5lib:


depends bioconductor-rhdf5lib:


depends libblas:


depends libgcc-ng:


depends liblapack:


depends libstdcxx-ng:


depends r-base:


depends r-matrix:

depends r-rcpp:



You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install bioconductor-chihaya

and update with::

   mamba update bioconductor-chihaya

To create a new environment, run:

mamba create --name myenvname bioconductor-chihaya

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull<tag>

(see `bioconductor-chihaya/tags`_ for valid values for ``<tag>``)

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