bioconductor-chipxpress¶
ChIPXpress takes as input predicted TF bound genes from ChIPx data and uses a corresponding database of gene expression profiles downloaded from NCBI GEO to rank the TF bound targets in order of which gene is most likely to be functional TF target.
| Home | http://bioconductor.org/packages/3.7/bioc/html/ChIPXpress.html |
| Versions | 1.24.0, 1.22.0 |
| License | GPL(>=2) |
| Recipe | https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-chipxpress |
| Links | biotools: chipxpress, doi: 10.1186/1471-2105-14-188 |
Installation¶
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-chipxpress
and update with:
conda update bioconductor-chipxpress
A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-chipxpress.
Link to this page¶
Render an 
badge with the following Markdown:
[](http://bioconda.github.io/recipes/bioconductor-chipxpress/README.html)
