recipe bioconductor-chipxpress

ChIPXpress takes as input predicted TF bound genes from ChIPx data and uses a corresponding database of gene expression profiles downloaded from NCBI GEO to rank the TF bound targets in order of which gene is most likely to be functional TF target.

Homepage:https://bioconductor.org/packages/3.8/bioc/html/ChIPXpress.html
License:GPL(>=2)
Recipe:/bioconductor-chipxpress/meta.yaml
Links:biotools: chipxpress, doi: 10.1186/1471-2105-14-188
package bioconductor-chipxpress

(downloads) docker_bioconductor-chipxpress

Versions:

1.26.0-0, 1.24.0-0, 1.22.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-chipxpress

and update with:

conda update bioconductor-chipxpress

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-chipxpress:<tag>

(see bioconductor-chipxpress/tags for valid values for <tag>)