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recipe
bioconductor-chipxpress¶ ChIPXpress takes as input predicted TF bound genes from ChIPx data and uses a corresponding database of gene expression profiles downloaded from NCBI GEO to rank the TF bound targets in order of which gene is most likely to be functional TF target.
Homepage: https://bioconductor.org/packages/3.8/bioc/html/ChIPXpress.html License: GPL(>=2) Recipe: /bioconductor-chipxpress/meta.yaml Links: biotools: chipxpress, doi: 10.1186/1471-2105-14-188
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package
bioconductor-chipxpress¶ 
Versions: 1.26.0-0, 1.24.0-0, 1.22.0-0
Depends: - bioconductor-affy >=1.60.0,<1.61.0
- bioconductor-biobase >=2.42.0,<2.43.0
- bioconductor-chipxpressdata >=1.20.0,<1.21.0
- bioconductor-frma >=1.34.0,<1.35.0
- bioconductor-geoquery >=2.50.0,<2.51.0
- r-base >=3.5.1,<3.5.2.0a0
- r-biganalytics
- r-bigmemory
Required By: Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-chipxpress
and update with:
conda update bioconductor-chipxpress
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-chipxpress:<tag>
(see bioconductor-chipxpress/tags for valid values for
<tag>)
Link to this page¶
Render an 
badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-chipxpress/README.html)