recipe bioconductor-clusterseq

Clustering of high-throughput sequencing data by identifying co-expression patterns

Homepage

https://bioconductor.org/packages/3.12/bioc/html/clusterSeq.html

License

GPL-3

Recipe

/bioconductor-clusterseq/meta.yaml

Identification of clusters of co-expressed genes based on their expression across multiple (replicated) biological samples.

package bioconductor-clusterseq

Versions

1.14.0-0,  1.12.0-0,  1.10.0-0,  1.8.0-1,  1.6.0-0

Depends

• bioconductor-bayseq >=2.24.0,<2.25.0

• bioconductor-biocgenerics >=0.36.0,<0.37.0

• bioconductor-biocparallel >=1.24.0,<1.25.0

• r-base >=4.0,<4.1.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-clusterseq

and update with:

conda update bioconductor-clusterseq

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-clusterseq:<tag>

(see bioconductor-clusterseq/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-clusterseq/README.html)