recipe bioconductor-clusterseq

Clustering of high-throughput sequencing data by identifying co-expression patterns

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/clusterSeq.html

License:

GPL-3

Recipe:

/bioconductor-clusterseq/meta.yaml

Identification of clusters of co-expressed genes based on their expression across multiple (replicated) biological samples.

package bioconductor-clusterseq

Versions:

1.22.0-0,  1.18.0-0,  1.16.0-0,  1.14.0-1,  1.14.0-0,  1.12.0-0,  1.10.0-0,  1.8.0-1,  1.6.0-0

Depends:

• bioconductor-bayseq >=2.31.0,<2.32.0

• bioconductor-biocgenerics >=0.44.0,<0.45.0

• bioconductor-biocparallel >=1.32.0,<1.33.0

• r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-clusterseq

and update with:

conda update bioconductor-clusterseq

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-clusterseq:<tag>

(see bioconductor-clusterseq/tags for valid values for <tag>)

Download stats

Link to this page

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